TREX2-FrCas9 Nuclease
Product Introduction
TREX2-FrCas9 is an engineered protein created by fusing FrCas9 with Three-prime Repair Exonuclease 2 (TREX2). By introducing exonuclease activity, it significantly alters the DNA repair outcomes produced by the CRISPR-Cas9 system. TREX2 is an exonuclease with 3'→5' directionality that progressively digests nucleotides from DNA double-strand break ends. When fused with FrCas9, it can generate larger fragment deletions at the cleavage site.
Traditional CRISPR-Cas9 systems, after introducing DNA double-strand breaks, rely on the cellular non-homologous end joining (NHEJ) pathway for repair, which typically results in small insertion or deletion mutations (mostly less than 10 bp). This small-scale editing may be insufficient to completely disrupt gene function for certain applications, particularly those targeting non-coding RNAs, regulatory elements, or protein domains with structural functions. The TREX2-FrCas9 fusion protein overcomes this limitation: after FrCas9 generates a double-strand break at the target site, the fused TREX2 immediately performs 3'→5' exonucleolytic digestion on the broken ends, enlarging the gap and forcing the cell to produce significantly larger deletions (up to hundreds of base pairs) during NHEJ repair.
Product Specifications
Parameter | Specification |
Source | Recombinant expression in E. coli |
Molecular Weight | ~160 kDa |
Concentration | 20 µM |
PAM Sequence | 5'-NNTA-3' |
Cleavage Product | Blunt-ended DSB |
Purity | ≥95% (SDS-PAGE) |
Endotoxin | <1 EU/μg |
Storage Buffer | 50 mM Tris-HCl, 300 mM NaCl, 0.1 mM EDTA, 1 mM DTT, 50% Glycerol |
10× Reaction Buffer | 50 mM Tris-HCl, 100 mM NaCl, 10 mM MgCl₂, 100 μg/ml BSA, pH 7.9 |
Storage Conditions | Long-term storage at -80°C; short-term storage at -20°C |
Product Specifications
Specifications | Catalog Number | Concentration | Volume |
100 pmol | GR100901 | 20 μM | 5 μL |
500 pmol | GR100902 | 20 μM | 25 μL |
2500 pmol | GR100903 | 20 μM | 125 μL |
Application Scenarios
Large Fragment Deletions: Efficiently generating broad genomic deletions.
Non-coding RNA Knockout: Effective knockout of small RNA genes such as microRNA and lncRNA.
Regulatory Element Deletion: Deleting regulatory sequences like enhancers and silencers.
Complete Gene Inactivation: Ensuring complete functional loss of target genes.
Structural Variation Studies: Modeling diseases associated with large fragment deletions.
References
He Y, et al. (2024). Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant Biotechnol J. 22(9):2488-2503.
Yin J, et al. (2022). Optimizing genome editing in plants using TREX2-Cas fusion proteins. Nature Plants. 8(8):930-939.
Tian R, et al. (2025). Systematic high-throughput evaluation reveals FrCas9's superior specificity and efficiency for therapeutic genome editing. Science Advances. 11(13):7334.